D2I2.

Data downloads

The datasets behind the site, as JSON. Built entirely on public sources (1000 Genomes, PGS Catalog, gnomAD, AlphaMissense) โ€” see the methods for how each was computed and its limitations.

Reuse is welcome; a formal open-data license (CC BY 4.0) and a versioned/DOI release are being set up. Until then, please cite as below and email if you plan to build on it.

Allele frequencies (SAS vs EUR)

Effect-allele frequencies for curated variants across the 5 South-Asian 1000G subpopulations (PJL/GIH/BEB/ITU/STU) plus SAS/EUR/EAS/AFR/AMR super-populations.

1000 Genomes phase 3
โ†“ JSON
PRS mis-stratification

Per-PGS ร— per-population mean-shift (SD) and mis-stratification % (share above the European top-10% cutoff) for 6 polygenic scores.

PGS Catalog + 1000G analytical mean-shift
โ†“ JSON
India whitespace ranking

The two-tier research-gap score over all 1,648 diseases: burden ร— South-Asian mis-calibration ร— tractability, with every component score and the per-lead why/study/learn.

D2I2 (see methods)
โ†“ JSON
Rare-pathogenic SAS leads

AlphaMissense-pathogenic missense variants observed in South Asians, flagged for European-absent and ClinVar-uncertain reclassification candidates.

MyVariant.info (AlphaMissense/dbNSFP) ร— gnomAD
โ†“ JSON
Variant pathogenicity

AlphaMissense / SIFT / PolyPhen predictions and SAS-vs-EUR enrichment for the curated variant panel.

MyVariant.info / dbNSFP
โ†“ JSON
Plain-language lexicon

1,049 medical terms with plain + student-level definitions โ€” the accessibility layer, reusable on its own.

D2I2
โ†“ JSON

How to cite

D2I2: Decoding Disease in India. India Whitespace Score and genomic transferability atlas. d2i2.org (accessed 2026-07-11).